AGENT SKILL

drive-biomni-lab

Use when the user wants to run a biomedical/clinical-genomics analysis on the hosted Biomni Lab (biomni.phylo.bio, Phylo Inc.) from Claude Code — starting or continuing a Biomni agent task, controlling effort/model, attaching skills or @-resources, polling a running run, switching/rotating Biomni accounts, or checking Biomni usage/billing. Triggers include "run this on Biomni", "ask Biomni to…", "start a Biomni task", "rotate Biomni accounts", "which Biomni account", or mentions of the bm_* tools. Applies to the cloud-hub `biomni` backend driven through the local cookie-broker.

License 许可
MIT
最近更新
2026-11-02
Stars
★ 0
Forks
0

01 前言 Front Matter

name
drive-biomni-lab
description
Use when the user wants to run a biomedical/clinical-genomics analysis on the hosted Biomni Lab (biomni.phylo.bio, Phylo Inc.) from Claude Code — starting or continuing a Biomni agent task, controlling effort/model, attaching skills or @-resources, polling a running run, switching/rotating Biomni accounts, or checking Biomni usage/billing. Triggers include "run this on Biomni", "ask Biomni to…", "start a Biomni task", "rotate Biomni accounts", "which Biomni account", or mentions of the bm_* tools. Applies to the cloud-hub `biomni` backend driven through the local cookie-broker.

03 SKILL.md 正文

Drive Biomni Lab (hosted) via the cookie-broker connector

The cloud-hub biomni backend exposes 25 bm_* tools that drive the hosted Biomni Lab far beyond its official 10-tool claude.ai connector — effort control, skills, @-resources, live HPC/GPU introspection, usage-aware account rotation — while never handling the credential (a local broker injects the session_id cookie; you only ever see masked previews). Setup + architecture: tools/mcp/cloud-hub/biomni-mcp/README.md.

Preconditions (fail fast, don't improvise auth)

  • The bm_* tools are live (hub restarted after the backend was registered).
  • For each account, its daemons are running — debug Chrome (signed in) + broker + refresher (see the biomni-mcp README / autostart.py).
  • If a call returns 401 / no-auth, the account's cookie is stale → tell the user to ensure that account's debug Chrome is signed in and its refresher is running. Do NOT try to obtain or paste a token yourself — auth is the broker's job.

The task loop

  1. Pick the account — bm_account_list / bm_account_current; switch with bm_account_switch or rotate with bm_account_cycle. Before a heavy run, check bm_billing_balance and rotate to an account with headroom (runs consume usage).
  2. Pick a project — bm_list_projects (or bm_create_project).
  3. Start a task — bm_create_session(project_id, content, model_profile=…):
    • model_profile is the EFFORT tier: standard (default) | fast | premium

Cautions

Escape hatch

04 同仓库更多 Skills

Prekzursil
Prekzursil/agent-skills-toolchain

clarify-requirements

Resolve genuine pre-execution ambiguity by scanning repo context, generating 1-6 grounded options, and asking 1-3 focused questions via AskUserQuestion. NOT for mid-task use (injection risk); NOT when the goal is already unambiguous; use to disambiguate vague prompts before any file edits.

★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

openmm-md

Run FREE, open-source, Windows-native GPU molecular dynamics via the openmm-md MCP (OpenMM + CUDA on the local NVIDIA GPU). Use for protein / protein-ligand MD when you want a free stack or are on Windows without a Schrodinger license. Covers the full workflow (prepare, solvate, minimize, equilibrate, production, analyze, mmgbsa) AND an honest decision guide vs Schrodinger Desmond, including how to run Desmond legitimately on Linux or a cloud GPU with a real license. This is a deliberately LESSER free alternative and does NOT replace the schrodinger MCP tools. Do NOT use it to pick a free tool when a validated FEP+, WaterMap, IFD-MD, or Prime MM-GBSA result is actually required.

Skill与智能体开发
★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

visual-review

Take screenshots of web pages and UI using Playwright for visual review and iteration

演示文稿测试与质量
★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

status

Diagnostic status report — shows metaswarm installation state, project setup, and potential issues

★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

start

Use when starting work on any task, when the user mentions metaswarm, or when the user wants to begin tracked development work

Skill与智能体开发
★ 0
Prekzursil
Prekzursil/agent-skills-toolchain

setup

Interactive project setup — detects your project, configures metaswarm, writes project-local files

★ 0